15 Best Employee Timesheet Apps for Agencies

15-best-employee-timesheet-apps-for-agencies

Digital tools that log, track, and report the time consumed by a project are employee timesheet apps. If you are a manager or a team leader, you need accurate data on working hours and want a breakdown of how time is distributed. You are a qualified candidate for using this app.

Unlike a basic punch-clock system or spreadsheet logs, modern timesheet software connects the time data directly to project budgets, resource planning, and payroll, giving agencies a complete picture of where effort goes.

In this blog, you will come across 15 employee timesheet apps that make time tracking and management feel like a breeze.

What Is an Employee Timesheet App for Agencies?

An employee timesheet app is a software designed to capture, manage, and report employee work hours. It connects time logs to clients, projects, and tasks. It is now possible to track billable and non-billable hours, manage project budgets, and generate reports.

Did You Know?
MGI (2025) indicates that the transition from manual to automated time-tracking systems can recover 12-15% of previously unbilled professional service hours. This directly improves bottom-line EBITDA by up to 5% through the mitigation of systemic revenue leakage.
Source: MGI

Why Does Your Agency Need a Timesheet Application?

Imagine it’s Friday evening, and you have completed all the tasks. All that is left is submitting timesheets. A few tasks don’t get logged because they seem irrelevant. Some hours are rounded off here and there. A couple of things forgot their way to the timesheets. 

Sounds harmless, right? But when this happens all across the team, it compounds, and the gaps become broad.

On paper, everything looks on track. But then things start to show. Next week's planning gets blurred. You end up figuring out who is doing what, and keep going in circles. One team member is too overloaded. One is playing video games all day. And all of it goes unnoticed, until it’s too late.

For micro and small teams, it's still manageable as everything is on the table at the end of the month. But when teams are distributed across time and locations, it becomes a lot more complex. You don’t know where the time is going, and the numbers don’t add up.

This is exactly the situation an employee timesheet application prevents. It makes timesheet entries easier and consistent. The work is logged when it happens. Not as an afterthought. You and your agency can manage distributed teams easily, follow up constantly, and get live updates.

Quick Comparison of Top 15 Employee Timesheet Software for Agencies

Tool Best Features Best For Pricing
eResource Scheduler Resource scheduling + timesheets + financials + management reports Agencies needing end-to-end visibility Module-based options from $5/resource/month annually
Harvest Simple time tracking + invoicing Freelancers & small agencies Plan-based options from $11/seat/month annually
Toggl Track One-click timer, visual reports Remote teams tracking billable hours Plan-based options from $9/user/month annually
Clockify Unlimited users free tier Budget-conscious teams Plan-based options from $4.99/seat/month annually
Jibble Facial recognition clock-in Field & distributed teams Plan-based options from $5.99/seat/month annually
My Hours Detailed project time tracking Small teams & consultants Plan-based options from $4/user/month annually
Hubstaff GPS + automated time tracking Field service & remote workforce Plan-based options from $4.99/user/month annually
QuickBooks Time Payroll-integrated timesheets QuickBooks users Plan-based options from $20/user/month annually
Buddy Punch Punch clock + scheduling Hourly workforce management Plan-based options from $4.49/user/month annually
Wrike Project management + time tracking Mid-to-large project teams Plan-based options from $10/user/month annually
Asana Task-based time tracking Teams using Asana for projects Plan-based options from $0.99/user/month annually
Everhour Deep project budget tracking Agencies billing by project Plan-based options from $6/user/month annually
Teamwork Client-facing time & billing Client service agencies Plan-based options from £9.99/user/month annually
ClickTime Workforce capacity + compliance Professional services firms Plan-based options from $12/user/month annually
Scoro All-in-one agency management End-to-end agency operations Plan-based options from $23.9/user/month annually

What Are the Best 15 Employee Timesheet Apps for Agencies?


                what-are-the-best-15-employee-timesheet-apps-for-agencies

Confused about which app works best for your agency? Below are the detailed notes on the 15 best employee timesheet apps for agencies. We tried to cover what each tool does well, what it lacks, and what it will cost as clearly as possible.

1. eResource Scheduler

eResource Scheduler is your all-in-one enterprise resource management software. Unlike standalone time tracking tools, it brings scheduling, timesheets, financials, management reports, and capacity planning under a single umbrella. 

Wondering how it will benefit you as a remote-first company dealing with different agencies? And each one has a different profile. Worry not. eResource Scheduler is industry-agnostic. It is also available as a web and a mobile app. This makes it compatible with remote and hybrid teams.

Timesheet Software of eResource Scheduler

The timesheet captures planned vs actual efforts of resources across projects. Your employees can log time from a desktop or a mobile, and you get instant visibility into variances between scheduled and logged hours. With the cross-functional dashboard view, you can also see time distribution across all resources and projects.

Key Features

  • Customizable fields to match your agency’s unique workflow
  • Role-based access to control what each user sees and edits
  • On-the-go mobile app access for field and remote employees
  • High calendar configurability to match your team’s work patterns
  • Intuitive navigation that reduces the learning curve for new users
  • Financial data tracking to connect time to project costs and margins
  • Enterprise-wide real-time visibility into team utilization and time logs
  • One-click entries approval to streamline the manager review process
  • Planned vs Actual Reports that highlight where efforts deviate from plans

One User Remarks:
“I use eResource Scheduler to coordinate technical teams and network specialists across multiple regions. The planned vs. actual visibility helps us spot when a project is going over hours within days, not weeks. That early signal gives us time to course-correct before it affects the budget, instead of only realizing the overrun when invoices are already out.”
Source: G2

Benefits

  • Enriched team utilization
  • Improved risk management
  • Cross-project financial visibility
  • Enhanced scheduling capability
  • Reduced employee burnout risk
  • Improved resource planning process

Free Trial: Available

Want to track time, manage resources, and monitor project budgets, all in one place? Explore the eResource Scheduler's timesheet and resource scheduling modules.

book-demo

2. Harvest

A time tracking and invoicing tool focused on recording billable hours. Are you a freelancer, a small agency, or a client service team? Then this tool is for you.

Strengths Drawbacks
Timer-based time tracking Reporting is relatively basic
Alerts when hours approach the set limit Gets expensive for large teams
Built-in invoicing that converts time logs to client bills Limited resource scheduling features

Free Trial: Available

3. Toggl Track

A tool with a one-click timer and a minimal-friction approach to time tracking. It is for remote and distributed teams that need a fast, easy way to log hours across projects and clients.

Strengths Drawbacks
One-click timer No built-in invoicing
Browser extension Free plan limited to 5 users
Color-coded project reports Limited resource scheduling features

Free Trial: Available

4. Clockify

One of the free employee timesheet apps available. Provides time tracking, project, and task organization. Used by agencies and teams just starting to formalize time tracking.

Strengths Drawbacks
Kiosk of shared clock-ins Interface feels cluttered
Timer, timesheet & calendar views Lacks advanced reporting
Attendance & leave tracking (paid plans) Time entry editing is tedious

Free Trial: Available

5. Jibble

Looking for a time-tracking app with attendance management? Now you have your solution. This app has GPS tracking to verify locations. It can also schedule a shift for you.

Strengths Drawbacks
Built-in leave tracking UI is more HR-focused
Real-time attendance dashboard Falls short on advanced reporting
Payroll integrations with platforms like ADP Project-based time tracking feels shallow

Free Trial: Available

A user ranted, “My overall experience has been time consuming and irritating. It is not able to adjust to a fiscal year instead of a calendar year. On January 1st, everything resets.”
Source: Capterra

6. My Hours

It's for you if you are a small team, want detailed timelogs, and basic reporting. Also supports task-level time tracking, billable rate setting, and simple client reports.

Strengths Drawbacks
Client-facing reports Limited integrations
Billable vs non-billable tracking No resource management features
Budget tracking indicators Not ideal for agencies with complex structures

7. Hubstaff

This is a fair deal if you want tracking, GPS, scheduling, payroll integrations, and project budgeting in one platform.

Strengths Drawbacks
Automated time tracking Some features require higher plans
Project budgeting with alerts Pricing compounds quickly with add-ons
Scheduling and shift management Activity monitoring and screenshots are invasive

Free Trial: Available

8. QuickBooks Time

A time tracking and scheduling tool tightly integrated with the QuickBooks ecosystem. Includes GPS tracking and shift scheduling for field teams.

Strengths Drawbacks
Native integration Very expensive
Labor law compliance Value for money for QuickBooks users
Real-time crew management Rigid reporting outside QuickBooks workflow

Free Trial: Available

9. Buddy Punch

An hourly time tracking and scheduling tool. Your employees punch to clock in and out. You track their attendance, overtime, and schedules.

Strengths Drawbacks
Payroll export Less suited for projects
Multiple clock-in options Reporting depth is limited
Automatic overtime calculations Pricing is significant as teams grow

Free trial: Available

10. Wrike

Project management platform that tracks time. If your agency is already using the software, it will be practical to opt for this option.

Strengths Drawbacks
Customizable dashboards Less suited for time-tracking
Request forms and intake workflows Complex to set up for newer teams
Task-level time logging connected to timeline Advanced features require higher-tier plans

A very disappointed user reported, “Wrike is not very user-friendly, and its project structure doesn’t effectively support practical project management. The calendar views are difficult to navigate, tagging projects is cumbersome, and there are no pre-built sections or tags for tracking budgets.”
Source: G2

Free Trial: Available

11. Asana

A management tool with time tracking through native integrations. It is not a dedicated timesheet app. But it works well as a part of an ecosystem.

Strengths Drawbacks
Task-based time estimates Native time-tracking is limited
Automated workflows and approvals Timesheets require additional tools
Reporting dashboard across project portfolios Not an ideal standalone timesheet software

Free Trial: Available

12. Everhour

A project time tracking and budget tool for agencies and professional services. Will do project budget tracking, bill-by-project billing, and cost control for your agency.

Strengths Drawbacks
Budget tracking Pricing is high
Estimates vs actual hour reporting Standalone use limits functionality
Invoice generation based on tracked time Requires an existing project management tool

Free Trial: Available

13. Teamwork

A project team management and client collaboration tool. It has built-in time tracking to see the time logged by person or project. Generate reports that are ready for clients.

Strengths Drawbacks
Invoice generation Limited integrations
Resource management Interface requires a learning curve
Billable and non-billable tagging Features can feel complex for time tracking

Free Trial: Available

14. ClickTime

A workforce capacity planning and time tracking platform. For professional services firms that need to track both employee hours and organizational capacity.

Strengths Drawbacks
Capacity planning Pricing is high
Compliance time tracking UI is enterprise-focused
Approval workflows for time submissions Set-up requires complex configuration

Free Trial: Available

15. Scoro

A comprehensive agency management platform. For agencies that want quoting, project management, time tracking, billing, and reporting in one system.

Strengths Drawbacks
Resource planning Pricing is high
End-to-end profitability management Requires a steep learning curve
Real-time profitability dashboards per project Full value needs multi-function usage at once

A client remarked, “I had a generally negative experience using Scoro. I sometimes felt like I was using more time than I was saving (or being productive) while figuring out how to use the software and run reports for management meetings.”

Source: Capterra

Free Trial: Available

Expert Evaluation:
A workforce report by the Society for Human Resource Management (SHRM) found that organizations using structured time tracking tools reduced payroll errors by up to 25%, directly improving employee trust and financial accuracy.

How to Choose the Right Agency Timesheet Solution?

When dozens of options are available, it becomes a task to choose one. Selecting the right application filters down to understanding the needs of your agency. Here are six evaluation criteria to guide your decision.

1. What type of work is your agency doing?

Before evaluating tools, know your billing model. If you bill clients by hours, you need billable hours tracking and invoicing. If you run a retainer-based account, budget tracking matters more. If you want to keep a log of your employee’s efforts without privacy invasion, you need flexible timesheet entries.

2. How many people need access, and where are they working?

Distributed and remote teams benefit from mobile-first apps or software that provide a mobile app as well. Co-located teams may prefer shared dashboards. If your agency's hierarchy is complex, go for role-based access.

3. Do you need resource scheduling alongside time tracking?

Pure time tracking tools let you plan what happened. Resource scheduling tools let you plan what should happen and then compare it to reality. For agencies that juggle multiple clients and projects, this visibility is a significant advantage. 

If you are looking for software with scheduling and timesheets, consider eResource Scheduler. It has both features in one system.

4. What tools do you already use?

Look for a timesheet tool that can fit seamlessly with the one you are already using. Just like a puzzle piece. Integration compatibility will reduce data re-entry.

5. What is your budget?

Some tools offer free plans, but with limited features. When looking for a tool, evaluate the cost per seat against the features you actually see. Some tools offer plan-based options, others module-based.

6. How important is reporting and financial visibility?

Agencies that actively monitor project profitability need more than raw time logs. Look for tools that connect hours worked to project budgets and show plan vs actual reports.

Ready to move from scattered spreadsheets to a single system that connects scheduling, timesheets, management reports, and project financials? eResource Scheduler gives your agency the visibility to plan better, bill accurately, and grow profitably.

14-day-free-trail

Making the Right Call for Your Agency’s Time Tracking

Choosing the right timesheet application is an operational decision. The best timesheet apps for agencies do more than just track hours. They connect your time data to project budgets, resource plans, and client billing. It gives you the visibility you need to run profitable, well-organized, and productive teams.

Do you need a free tool to get started? A simple billing-focused tracker? Or a full resource management and timesheet software? There is a right fit for your agency in this list. Start with what you need today and choose a tool that grows with you.

Frequently Asked Questions

1. Why do agencies need time-tracking software?

Agencies manage multiple clients and projects simultaneously. Without time tracking, it is impossible to know whether projects are on budget, whether teams are overworked, or whether billing reflects actual effort. Time tracking software makes this visible, accurate, and manageable.

2. How to know if my agency needs a timesheet app?

If your team regularly ends projects over budget, if managers cannot quickly answer how many hours a project has consumed, or if your billing process relies on memory or estimation rather than logged data, your agency needs a timesheet app.

3. What best practices should I employ when using a timesheet app?

Log time daily rather than reconstructing it at the end of the week. Set up projects and tasks before asking employees to log time. Review timesheet reports weekly, not monthly. And connect time data to project budgets so you can act on variances before they become problems.

4. Can timesheet apps integrate with payroll software?

Yes, most timesheet apps integrate with payroll systems, allowing approved work hours, overtime, and leave data to sync automatically. This removes manual data entry and reduces errors. Payroll processing becomes faster and more accurate.

5. How do timesheet apps help improve project estimates?

Timesheet data shows how much time similar tasks and projects actually take. Agencies can use this to compare planned vs actual effort, adjust future estimates, and avoid underquoting work.

Blog Author
Marketing Consultant
Nikita Sharma
Nikita Sharma, an impassioned Marketing Consultant at eResource Scheduler, has been shaping the digital marketing landscape since January 2021. With a rich background in web development and digital marketing strategy, she's a beacon of innovation in the field. Nikita has achieved remarkable milestones, including reaching over 1 million social media users for the Jaipur International Film Festival and 3 million-plus SERP impressions for Enbraun Technologies. Her tenure at Nexa as a Digital Marketing Strategist in Dubai, certified by Google and Hubspot, underscores her profound expertise. Nikita's educational journey in Computer Science from Rajasthan Technical University and advanced programming courses have been pivotal in her career. She exemplifies dedication, creativity, and a deep understanding of digital trends, making significant impacts across diverse industries.

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